Wheatleafnet: A Novel Explainable Ai-Based Hybrid DeepLearning Approach for ‎Wheat Leaf Disease Detection and Classification

  • Authors

    • Chatla Subbarayudu School of Computer Science and Engineering, Vellore Institute of Technology, Vellore 632014, India
    • Mohan Kubendiran School of Computer Science and Engineering, Vellore Institute of Technology, Vellore 632014, India
    https://doi.org/10.14419/29znr475

    Received date: October 13, 2025

    Accepted date: November 21, 2025

    Published date: December 17, 2025

  • Wheat Leaf Disease; Convolutional Neural Networks (CNN); Computer Vision; Data Augmentation; Deep Learning; ‎Image Processing
  • Abstract

    Agriculture is the second-largest sector in India, contributing 20.2% to the national GDP, with wheat ‎cultivation playing a crucial role in global food security. However, wheat is highly susceptible to fungal, ‎bacterial, viral, and nutrient deficiency-related diseases that can severely reduce yield. Early and accurate ‎disease detection is therefore vital for sustainable crop management. In this study, we introduce ‎WheatLeafNet, a deep learning framework for multi-class wheat leaf disease classification. The dataset ‎comprises 6,247 images across 24 categories (23 disease types and healthy samples). To enhance model ‎robustness and mitigate overfitting, data augmentation and regularization strategies were employed, ‎alongside ablation studies on their effectiveness. We evaluated a custom CNN and transfer learning ‎architectures (MobileNetV2, ResNet50, EfficientNet-B0) under four optimizers (SGD, RMSProp, ‎Adam, and AdaGrad), with stratified 5-fold cross-validation ensuring reliable assessment. Among the ‎tested models, MobileNetV2 with the AdaGrad optimizer achieved the best performance, reaching an ‎accuracy of 97.91% without augmentation and 97.84% with augmentation. Comprehensive evaluation ‎metrics, including per-class precision, recall, F1-score, ROC-AUC, Expected Calibration Error (ECE), ‎and Grad-CAM visualizations, confirm the reliability and interpretability of the framework. The ‎integration of augmentation, optimization, and explainability strengthens the model’s generalizability for ‎real-world applications. The proposed system offers an effective and scalable solution for early disease ‎identification in wheat, enabling timely interventions, reducing crop loss, and promoting sustainable ‎agricultural practices. Future work will incorporate segmentation-driven severity estimation and multi-‎label detection to enable real-world deployment.

  • References

    1. Erenstein, Olaf, Moti Jaleta, Khondoker Abdul Mottaleb, Kai Sonder, Jason Donovan, and Hans-Joachim Braun. "Global trends in wheat production, consumption, and trade." In Wheat improvement: food security in a changing climate, pp. 47-66. Cham: Springer International Publishing, 2022. https://doi.org/10.1007/978-3-030-90673-3_4.
    2. FAOStat (2020) FAO Stat. http://www.fao.org/faostat
    3. S.D. Pradeep, Vijay Paul, Rakesh Pandey, Nisha, Pramod Kumar, Chapter 9 - Relevance of ear and ear-related traits in wheat under heat stress, Cli-mate Change and Crop Stress, Academic Press, 2022, Pages 231-270, ISBN 9780128160916, https://doi.org/10.1016/B978-0-12-816091-6.00013-4. https://doi.org/10.1016/B978-0-12-816091-6.00013-4.
    4. S. C. Bhardwaj, G. P. Singh, O. P. Gangwar, P. Prasad and S. Kumar, “Status of wheat rust research and progress in rust management-Indian con-text,” Agronomy, vol. 9, no. 12, pp. 892, 2019. https://doi.org/10.3390/agronomy9120892
    5. D. Zhang, Q. Wang, F. Lin, X. Yin, C. Gu et al., “Development and evaluation of a new spectral disease index to detect wheat fusarium head blight using hyperspectral imaging,” Sensors, vol. 20, no. 8, pp. 2260, 2020. https://doi.org/10.3390/s20082260.
    6. https://www.statista.com/statistics/270024/global-stocks-of-wheat/.
    7. M. Scudder, N. Wampe, Z. Waviki, G. Applegate, and J. Herbohn, “Smallholder cocoa agroforestry systems; is increased yield worth the labour and capital inputs?” Agricultural Systems, vol. 196, Article ID 103. https://doi.org/10.1016/j.agsy.2021.103350
    8. Mohanty, S.P., Hughes, D.P., Salath´e, M., 2016. Using deep learning for image-based plant disease detection. Frontiers in plant science 7, 1419. https://doi.org/10.3389/fpls.2016.01419.
    9. J. Boulent, S. Foucher, J. Theau and P. L. St-Charles, “Convolutional neural networks for the automatic identification of plant diseases,” Front. Plant Sci., vol. 10, pp. 1–16, 2019. https://doi.org/10.3389/fpls.2019.00941
    10. Sripathi Venkata Naga, S.K.; Yesuraj, R.; Munuswamy, S.; Arputharaj, K. A Comprehensive Survey on Certificate-Less Authentication Schemes for Vehicular Ad hoc Networks in Intelligent Transportation Systems. Sensors 2023, 23, 2682. https://doi.org/10.3390/s23052682.
    11. Subbarayudu, C., & Kubendiran, M. (2025). Segmentation-based lightweight multi-class classification model for crop disease detection, classification, and severity assessment using DCNN. PLoS One, 20(5), e0322705. https://doi.org/10.1371/journal.pone.0322705.
    12. Subbarayudu, C., & Kubendiran, M. (2025). An automated hybrid deep learning framework for paddy leaf disease identification and classification. Scientific Reports, 15(1), 26873. https://doi.org/10.1038/s41598-025-08071-6.
    13. Subbarayudu, C., & Kubendiran, M. (2024). A Comprehensive Survey on Machine Learning and Deep Learning Techniques for Crop Disease Pre-diction in Smart Agriculture. Nature Environment & Pollution Technology, 23(2). https://doi.org/10.46488/NEPT.2024.v23i02.003
    14. Karlekar, Aditya, and Ayan Seal. "SoyNet: Soybean leaf diseases classification." Computers and Electronics in Agriculture 172 (2020): 105342. https://doi.org/10.1016/j.compag.2020.105342.
    15. Liu, Xiaolong, Zhidong Deng, and Yuhan Yang. "Recent progress in semantic image segmentation." Artificial Intelligence Review 52 (2019): 1089-1106. https://doi.org/10.1007/s10462-018-9641-3
    16. Kondaveeti, H. K., & Simhadri, C. G. (2025). Evaluation of deep learning models using explainable AI with qualitative and quantitative analysis for rice leaf disease detection. Scientific Reports, 15(1), 31850. https://doi.org/10.1038/s41598-025-14306-3.
    17. Salman, Z., Muhammad, A., & Han, D. (2025). Plant disease classification in the wild using vision transformers and mixture of experts. Frontiers in Plant Science, 16, 1522985. https://doi.org/10.3389/fpls.2025.1522985.
    18. Chen, Junde, Jinxiu Chen, Defu Zhang, Yuandong Sun, and Yaser Ahangari Nanehkaran. "Using deep transfer learning for image-based plant disease identification." Computers and Electronics in Agriculture 173 (2020): 105393. https://doi.org/10.1016/j.compag.2020.105393
    19. Ashraf, Mahmood, Mohammad Abrar, Nauman Qadeer, Abdulrahman A. Alshdadi, Thabit Sabbah, and Muhammad Attique Khan. "A Convolutional Neural Network Model for Wheat Crop Disease Prediction." Computers, Materials & Continua 75, no. 2 (2023). https://doi.org/10.32604/cmc.2023.035498
    20. Arun Pandian J.,1Kanchanadevi K.,1N.R. Rajalakshmi, G.Arulkumaran, An Improved Deep Residual Convolutional Neural Network for Plant Leaf Disease Detection, Vol.2022, Article ID5102290, pp.1-9, 2022. https://doi.org/10.1155/2022/5102290.
    21. Long, Megan, Matthew Hartley, Richard J. Morris, and James KM Brown. "Classification of wheat diseases using deep learning networks with field and glasshouse images." Plant Pathology 72, no. 3 (2023): 536-547. https://doi.org/10.1111/ppa.13684
    22. Aboneh, T.; Rorissa, A.; Srinivasagan, R.; Gemechu, A; Computer Vision Framework for Wheat Disease Identification and Classification Using Jet-son GPU Infrastructure. Technologies 2021, 9, 47. https://doi.org/10.3390/technologies9030047.
    23. Nigam, Sapna, Rajni Jain, Sudeep Marwaha, Alka Arora, Md Ashraful Haque, Akshay Dheeraj, and Vaibhav Kumar Singh. "Deep transfer learning model for disease identification in wheat crop." Ecological Informatics 75 (2023): 102068. https://doi.org/10.1016/j.ecoinf.2023.102068
    24. Rangarajan, Aravind Krishnaswamy, Rebecca Louise Whetton, and Abdul Mounem Mouazen. "Detection of fusarium head blight in wheat using hy-perspectral data and deep learning." Expert Systems with Applications 208 (2022): 118240. https://doi.org/10.1016/j.eswa.2022.118240.
    25. Zhang, Dong-Yan, Wenhao Zhang, Tao Cheng, Xin-Gen Zhou, Zihao Yan, Yuhang Wu, Gan Zhang, and Xue Yang. "Detection of wheat scab fungus spores utilizing the Yolov5-ECA-ASFF network structure." Computers and Electronics in Agriculture 210 (2023): 107953. https://doi.org/10.1016/j.compag.2023.107953
    26. Schirrmann M, Landwehr N, Giebel A, Garz A and Dammer K-H (2021) Early Detection of Stripe Rust in Winter Wheat Using Deep Residual Neu-ral Networks. Front. Plant Sci.12:469689. https://doi.org/10.3389/fpls.2021.469689.
    27. RN Singh, Prameela Krishnan, Vaibhav K. Singh & Bappa Das, (2023) Estimation of yellow rust severity in wheat using visible and thermal imaging coupled with machine learning models, Geocarto International, 38:1, 2160831, https://doi.org/10.1080/10106049.2022.2160831.
    28. Alshammari, Hamoud H., Ahmed I. Taloba, and Osama R. Shahin. "Identification of olive leaf disease through optimized deep learning approach." Alexandria Engineering Journal 72 (2023): 213-224. https://doi.org/10.1016/j.aej.2023.03.081.
    29. Lachgar, Mohamed, Hamid Hrimech, and Ali Kartit. "Optimization techniques in deep convolutional neuronal networks applied to olive diseases clas-sification." Artificial Intelligence in Agriculture 6 (2022): 77-89. https://doi.org/10.1016/j.aiia.2022.06.001
    30. Jiang, Zhencun, Zhengxin Dong, Wenping Jiang, and Yuze Yang. "Recognition of rice leaf diseases and wheat leaf diseases based on multi-task deep transfer learning." Computers and Electronics in Agriculture 186 (2021): 106184. https://doi.org/10.1016/j.compag.2021.106184.
    31. Kumar, D., Kukreja, V. & Singh, A. A novel hybrid segmentation technique for identification of wheat rust diseases. Multimed Tools Appl (2024). https://doi.org/10.1007/s11042-024-18463-x.
    32. A. Alharbi, M. U. G. Khan and B. Tayyaba, "Wheat Disease Classification Using Continual Learning," in IEEE Access, vol. 11, pp. 90016-90026, 2023, https://doi.org/10.1109/ACCESS.2023.3304358
    33. Pan, Qian, Maofang Gao, Pingbo Wu, Jingwen Yan, and Mohamed AE AbdelRahman. "Image classification of wheat rust based on ensemble learn-ing." Sensors 22, No. 16 (2022): 6047. https://doi.org/10.3390/s22166047
    34. Xu, Laixiang, Bingxu Cao, Fengjie Zhao, Shiyuan Ning, Peng Xu, Wenbo Zhang, and Xiangguan Hou. "Wheat leaf disease identification based on deep learning algorithms." Physiological and Molecular Plant Pathology 123 (2023): 101940. https://doi.org/10.1016/j.pmpp.2022.101940.
    35. Tegegne, A. G., Walle, Y. M., Haile, M. B., Yehulu, G. T., & Yohannes, S. T. (2025). Comparative evaluation of CNN architectures for wheat rust diseases classification. Discover Applied Sciences, 7(10), 1070. https://doi.org/10.1007/s42452-025-07334-1.
    36. Liu, S., Zhang, C., & Wang, Z. (2025). MSDP-SAM2-UNet: A Novel Multi-Scale and Dual-Path Model for Wheat Leaf Disease Segmentation Based on SAM2-UNet. Applied Sciences, 15(21), 11778. https://doi.org/10.3390/app152111778
    37. Dong, T., Ma, X., Huang, B., Zhong, W., Han, Q., Wu, Q., & Tang, Y. (2024). Wheat disease recognition method based on the SC-ConvNeXt net-work model. Scientific Reports, 14(1), 32040. https://doi.org/10.1038/s41598-024-83636-5
    38. Moon, M. M. (2025). A Deep Learning Framework for Precise Detection and Classification of Wheat Leaf Diseases. Machine Learning Research. https://doi.org/10.11648/j.mlr.20251001.16.
    39. https://www.kaggle.com/datasets/jayaprakashpondy/wheat-leaf-disease.
    40. https://www.kaggle.com/datasets/kushagra3204/wheat-plant-diseases.
    41. Long, M., Hartley, M., Morris, R. J., & Brown, J. K. (2023). Classification of wheat diseases using deep learning networks with field and glasshouse images. Plant Pathology, 72(3), 536-547. https://doi.org/10.1111/ppa.13684.
    42. Lu, J., Hu, J., Zhao, G., Mei, F., & Zhang, C. (2017). An in-field automatic wheat disease diagnosis system. Computers and electronics in agriculture, 142, 369-379. https://doi.org/10.1016/j.compag.2017.09.012
    43. Krizhevsky, A., Sutskever, I., & Hinton, G. E. (2017). ImageNet classification with deep convolutional neural networks. Communications of the ACM, 60(6), 84-90. https://doi.org/10.1145/3065386.
    44. Gonzalez, R. C. (2009). Digital image processing. Pearson education india.
    45. Goodfellow, I., Bengio, Y., Courville, A., & Bengio, Y. (2016). Deep learning (Vol. 1, No. 2). Cambridge: MIT press.
    46. Cap, Q. H., Uga, H., Kagiwada, S., & Iyatomi, H. (2020). Leafgan: An effective data augmentation method for practical plant disease diagnosis. IEEE Transactions on Automation Science and Engineering, 19(2), 1258-1267. https://doi.org/10.1109/TASE.2020.3041499.
    47. Saleem, N., Balu, A., Jubery, T. Z., Singh, A. K., Singh, S. K., & Ganapathysubramanian, B. (2024). Class-specific Data Augmentation for Plant Stress Classification. arXiv:2406.13081. https://doi.org/10.1002/ppj2.20112.
    48. Kohavi, R. (1995, August). A study of cross-validation and bootstrap for accuracy estimation and model selection. In Ijcai (Vol. 14, No. 2, pp. 1137-1145).
    49. Ruder, S. (2016). An overview of gradient descent optimization algorithms. arXiv preprint arXiv:1609.04747.
    50. Shorten, C., & Khoshgoftaar, T. M. (2019). A survey on image data augmentation for deep learning. Journal of big data, 6(1), 1-48. https://doi.org/10.1186/s40537-019-0197-0.
  • Downloads

  • How to Cite

    Subbarayudu , C. ., & Kubendiran, M. (2025). Wheatleafnet: A Novel Explainable Ai-Based Hybrid DeepLearning Approach for ‎Wheat Leaf Disease Detection and Classification. International Journal of Basic and Applied Sciences, 14(8), 399-419. https://doi.org/10.14419/29znr475